From: Novel Cul3 binding proteins function to remodel E3 ligase complexes
Protein name | Number of residues | Accession # | Domains | Peptide sequence | Ub-sites | Charge state | Mass error (ppm) | XCorr value | Exp L2 | Exp M3 | Exp M4 | Exp M5 | Exp M6 | Exp M7 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cell division/Cell cycle control | ||||||||||||||
Rb1-inducible coiled coil protein 1 | 1594 | NP_055596 | No domain | LTHLGTAVSVMAK* | K201 | 2 | 12.4 | 2.012 | 1 | - | - | - | - | - |
 |  |  |  | TFVQK*EQCDFSNSLK | K828 | 2 | 19.7 | 2.885 | - | 1 | - | - | - | - |
Cytoskeleton | ||||||||||||||
DST protein | 258 | AAH04912 | GAS2 | K*SPASKLDK | K249 | 2 | 15.5 | 2.055 | 1 | - | - | - | - | - |
 |  |  |  | SPASKLDK | none | 1 | 18.7 | 2.136 | 1 | - | - | - | - | - |
 |  |  |  | EKFILADGASQGMAAFRPR | none | 2 | 16.6 | 2.693 | - | 1 | - | - | - | - |
Filamin B | 2591 | BAD52434 | CH, IG_FLMN | ATQTGDASK | none | 1 | 18.6 | 1.584 | 1 | - | - | - | - | - |
 |  |  |  | ETTDFKVDTKAAGSGELGVTMK | none | 2 | 3.9 | 3.121 | - | 1 | - | - | - | - |
 |  |  |  | SGCIVNNLAEFTVDPK* | K673 | 2 | 9.7 | 2.139 | 1 | - | - | - | - | - |
Hormone receptor | ||||||||||||||
Thyroid hormone receptor interactor 11 | 1979 | NP_004230 | No domain | K*VAFDVK*MENEK | K670, K676 | 2 | 17.8 | 2.879 | - | - | 1 | 1 | 2 | - |
 |  |  |  | K*VAFDVKMENEK* | K670, K681 | 2 | 5.4 | 2.581 | 1 | - | - | - | - | - |
 |  |  |  | MQLLQSLQEQK | none | 2 | 0.6 | 2.463 | 1 | - | - | - | - | - |
Immune system | ||||||||||||||
Lymphocyte antigen 75 | 1722 | NP_002340 | FN2, CLECT | DGAICYK*PTK | K1514 | 2 | 6.6 | 2.182 | 1 | - | - | - | - | - |
 |  |  |  | DGAICYKPTK* | K1517 | 2 | 9.8 | 2.260 | 1 | - | - | - | - | - |
Metabolism | ||||||||||||||
Aspartate beta-hydroxylase isoform a | 758 | NP_004309 | Asp-B_Hydr, TPR, Asp-Arg-Hy | ARYGK*AQCEDDLAEK | K381 | 2 | 12.1 | 2.730 | - | 1 | - | - | - | - |
 |  |  |  | ARYGKAQCEDDLAEK* | K391 | 2 | 3.9 | 2.338 | - | 2 | - | - | - | - |
 |  |  |  | PKLLNK*FDK | K332 | 2 | 3.9 | 2.338 | 1 | - | - | - | - | - |
Muscle | ||||||||||||||
Long myosin light chain kinase | 1914 | AAQ02673 | S_TKc, FN3, IGcam | ESK*LDSLEAAAK | K284 | 2 | 5.0 | 2.382 | 1 | - | - | - | - | - |
 |  |  |  | ESKLDSLEAAAK*SK* | K293, K295 | 1 | 19.7 | 2.338 | 1 | - | - | - | - | - |
Myosin binding protein C, fast type | 1141 | NP_004524 | FN3, IGcam | TSEKK*SDTAGELDFSGLLK* | K175, K185 | 3 | 1.4 | 2.821 | 1 | - | - | - | - | - |
 |  |  |  | TSENAIVVVAGNK* | K562 | 2 | 12.6 | 2.967 | - | - | - | 1 | - | - |
Nesprin-1 | 8797 | AAN60442 | CH, SPEC | SAREKGER | none | 1 | 8.9 | 1.688 | 1 | - | - | - | - | - |
 |  |  |  | WVQYTAGKQTGIEVKDFGK* | K212 | 3 | 20.0 | 3.426 | - | 1 | - | - | - | - |
Neuron | ||||||||||||||
Synaptojanin 2A | 1288 | AAN73051 | Syja_N, IPPc | SSGKIFKDFHEGAINFGPTYK | none | 2 | 0.9 | 2.005 | 1 | - | - | - | - | - |
 |  |  |  | TGMGGK*AGNKGAVGIR | K678 | 2 | 3.6 | 2.048 | 1 | - | - | - | - | - |
Oncoprotein | ||||||||||||||
BRCA2 and CDKN1A interacting protein | 322 | CAI12093 | No domain | AGLIQSR | none | 1 | 9.2 | 1.813 | 1 | - | - | - | - | - |
 |  |  |  | NCEK*SMVEQLDK | K159 | 1 | 19.7 | 1.922 | 1 | - | - | - | - | - |
Signal transduction | ||||||||||||||
Endothelial differentiation, sphingolipid G-protein-coupled receptor, 1 | 382 | NP_001391 | 7tm_1 | CPSGDSAGKFK*R | K340 | 2 | 6.1 | 2.170 | 1 | - | - | - | - | - |
 |  |  |  | HYNYTGK* | K34 | 1 | 14.8 | 1.973 | 1 | - | - | - | - | - |
Triple functional domain (PTPRF interacting) variant | 2202 | BAD92991 | SPEC, SH3, RhoGEF, PH_TRIO | AFAAALDER | none | 2 | 15.9 | 3.027 | - | - | 1 | - | - | - |
 |  |  |  | LVNASVAFYK* | K1003 | 2 | 1.4 | 2.046 | 1 | - | - | - | - | - |
Ubiquitination | ||||||||||||||
Cullin3 | 768 | NP_003581 | Cullin | GVKGLTEQEVETILDK* | K414 | 2 | 11.9 | 2.443 | 1 | - | - | - | - | - |
Unknown function | ||||||||||||||
Chromosome 10 open reading frame 92 | 876 | AAH34223 | No domain | GRKGSIPR | none | 1 | 17.3 | 1.551 | 1 | - | - | - | - | - |
 |  |  |  | ARVQTPAVVADSGKSK | none | 2 | 6.7 | 2.024 | 1 | - | - | - | - | - |
 |  |  |  | K*GSIPR | K233 | 1 | 1.2 | 1.535 | 1 | - | - | - | - | - |
KIAA1602 protein | 906 | AAH33253 | No domain | EGAGGGSPLR | none | 2 | 11.5 | 2.039 | 1 | - | - | - | - | - |
 |  |  |  | SKGLPK* | K62 | 1 | 3.8 | 1.931 | 1 | - | - | - | - | - |
RING finger and CHY zinc finger domain containing protein 1 variant | 263 | BAD92309 | zf_CHY | DKK*QYHCENCGICR | K65 | 2 | 10.2 | 2.581 | - | 1 | - | - | - | - |
 |  |  |  | GYRCPLCMHSALDMTR | none | 2 | 1.1 | 2.126 | 1 | - | - | - | - | - |
 |  |  |  | PYK*CMHCEK*VFR | K306, K312 | 2 | 16.4 | 2.036 | 1 | - | - | - | - | - |