Table 2 Predicted cis-acting regulatory sequences of cell cycle-regulated gene clusters
From: Transcriptome changes and cAMP oscillations in an archaeal cell cycle
cluster | No. promoters | consensus sequence | No. promoters with motif | average No.of occurance per promoter | ∅ P-value | strand +/- |
|---|---|---|---|---|---|---|
1 | 3 | AMRRCRAC | 3 | 5 | 1,60E-04 | 10/5 |
1 | 3 | WGSAGKGSAACCTC | 3 | 1 | 2,79E-08 | 3/0 |
2 | 6 | MCGARKWMRAC | 5 | 2 | 1,08E-05 | 7/2 |
3 | 7 | THTHCWYKRWSGTGK | 6 | 2 | 1,20E-06 | 3/7 |
4 | 4 | SWWCGASSMSG | 4 | 5 | 1,60E-04 | 14/6 |
5 | 20 | CRBCGASSDCRHCGH | 18 | 3 | 7,88E-05 | 31/19 |
6 | 1 | --------- | ---- | ---- | ---- | ---- |
7 | 10 | RHSRYSRMCGA | 10 | 5 | 4,16E-04 | 35/15 |