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Table 1 Mutational analysis of the C-terminal hydrophobic region (Val245 to Val256) of ricin A-chain

From: Hydrophobicity of protein determinants influences the recognition of substrates by EDEM1 and EDEM2 in human cells

RTA decreased hydrophobicity

Position in RTA, C-terminal region

Primary residue

Altered residue

Comments

  

Uncharged

Charged

 

245

Val (V)

Ser (S)

-

Suggested

247

Ile (I)

Asn (N)

Asp (D)

Not recommended, might disrupt RTA fold

248

Leu (L)

Asn (N)

Asp (D)

Asp may change RTA interactions, Asn suggested

249

Ile (I)

Asn (N)

Asp (D)

Not recommended, might disrupt fold and affect interaction with B-chain

250

Pro (P)

Ala (A)

-

Not recommended, Ala changes the structure of RTA [23]

251

Ile (I)

Asn (N)

Asp (D)

Not recommended, affects interaction with B-chain

252

Ile (I)

Asn (N)

Asp (D)

Asp may change RTA interactions, Asn suggested

253

Ala (A)

Ser (S)

-

Suggested

254

Leu (L)

Asn (N)

Asp (D)

Not recommended, might disrupt RTA fold

255

Met (M)

Gln (Q)

Lys (L)

Not recommended, might disrupt RTA fold

256

Val (V)

Ser (S)

-

Not recommended, might disrupt RTA fold

RTA increased hydrophobicity

Position in RTA, C-terminal region

Primary residue

Altered residue

Comments

  

Uncharged

Charged

 

246

Ser (S)

Val (V)

-

Suggested

253

Ala (A)

Val (V)

-

Suggested

  1. Mutations that were chosen to be introduced into this region are marked in bold.