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Table 3 Marginal distributions (%) of amino acids by position relative to the S/T-site

From: Ridge regression estimated linear probability model predictions of O-glycosylation in proteins with structural and sequence data

Amino Acid

Eight positions to the left/right of the S/T-site for O-GalNAc glycosylated sequences

-8

-7

-6

-5

-4

-3

-2

-1

+1

+2

+3

+4

+5

+6

+7

+8

A

7.7

7.2

7.0

7.2

6.6

7.0

9.1

8.5

7.7

10.2

7.9

6.8

8.0

8.2

7.9

7.8

C

0.9

0.8

0.9

0.4

0.8

0.4

0.4

0.1

0.9

0.1

0.3

0.4

0.7

0.6

0.7

1.4

D

4.3

4.5

4.1

3.8

4.1

3.4

4.2

1.3

3.9

4.0

4.3

3.7

5.2

4.6

4.6

5.0

E

6.4

6.2

6.6

6.8

6.4

8.3

6.6

4.4

7.0

6.2

5.2

7.0

7.8

6.6

7.1

8.0

F

2.4

2.4

2.3

2.2

2.3

2.4

2.7

2.8

1.6

2.0

2.7

2.0

2.3

2.3

2.0

2.2

G

6.9

6.7

6.9

6.8

6.2

5.2

7.6

5.3

5.6

7.2

6.0

6.8

6.1

7.6

7.8

6.8

H

3.6

3.8

2.9

4.3

4.5

3.6

3.6

4.5

3.8

4.0

2.8

3.5

3.5

3.2

3.4

3.0

I

2.9

3.2

2.7

3.0

3.6

3.4

3.0

3.2

2.4

2.7

2.3

2.7

3.2

2.1

2.0

2.3

K

5.7

5.4

5.7

5.8

5.1

5.6

5.5

3.3

4.6

5.6

3.6

6.0

5.3

5.6

6.6

7.0

L

6.8

7.1

6.7

7.2

6.8

8.0

7.1

5.6

7.5

7.1

6.1

6.7

7.2

7.7

7.1

7.0

M

1.7

1.3

1.0

0.8

0.8

1.0

1.1

0.9

0.7

1.0

0.9

1.0

1.1

1.0

1.1

1.1

N

2.1

2.0

2.5

2.4

2.1

2.0

1.2

1.7

1.7

2.6

2.1

2.0

2.2

2.2

2.3

2.6

P

8.3

9.6

9.4

10.2

9.4

11.0

11.5

15.8

11.6

12.2

17.8

12.3

9.7

10.6

8.9

8.2

Q

4.7

4.3

4.4

4.4

4.7

4.2

4.5

3.9

4.9

3.9

4.2

3.9

3.6

4.0

4.9

4.2

R

7.5

6.5

7.5

7.2

7.5

6.8

6.2

5.1

5.9

5.8

4.7

6.5

6.9

7.5

6.7

6.8

S

9.4

10.6

11.5

10.1

11.8

10.3

9.0

10.3

10.4

11.3

10.8

10.3

9.6

10.1

10.5

9.1

T

11.5

10.8

10.6

10.2

10.1

8.3

8.0

11.2

12.0

6.8

10.9

10.2

9.5

9.7

10.0

10.4

V

5.2

5.8

5.4

5.2

5.5

6.7

6.0

9.7

6.2

5.1

5.4

6.1

6.0

4.5

4.9

4.8

W

1.0

0.6

0.5

0.8

0.5

0.9

0.8

0.5

0.6

0.7

0.5

1.0

0.6

0.5

0.5

1.3

Y

1.3

1.4

1.2

1.4

1.5

1.6

1.8

1.7

1.2

1.5

1.7

1.4

1.4

1.5

1.3

1.3