Skip to main content

Advertisement

Table 4 Marginal distributions (%) of amino acids by position relative to the S/T/Y/H-site

From: Ridge regression estimated linear probability model predictions of O-glycosylation in proteins with structural and sequence data

Amino Acid Seven positionsa to the left/right of the S/T-site for phosphorylated sequences
-7 -6 -5 -4 -3 -2 -1 +1 +2 +3 +4 +5 +6 +7
A 7 6.9 6.8 6.6 6.4 6.8 6.7 5.7 6.4 6.4 6.4 6.6 6.9 6.7
C 1.4 1.4 1.3 1.2 1.2 1.3 1.3 1.2 1.4 1.2 1.3 1.3 1.3 2.5
D 4.9 4.9 4.9 5 5 5.1 6.1 5.4 5.9 5.6 5.2 5.3 5.1 5.1
E 7.3 7.3 7 7.2 6.8 6.6 6 6.6 9.5 8.5 7.8 7.6 7.8 7.5
F 2.6 2.6 2.8 2.6 2.4 2.5 2.8 3.1 2.3 2.5 2.6 2.7 2.7 2.7
G 6.9 6.7 6.6 7.1 6.8 6.7 8.1 7.6 6.9 7.1 6.5 6.6 6.6 6.5
H 2.2 2.2 3.3 2.2 2.5 2.1 3.7 2 2 2.1 2.1 2.3 2.2 2.3
I 3.6 3.7 3.6 3.5 3.4 4.1 3.9 3.6 3.5 3.5 3.8 3.5 3.6 3.5
K 7.4 7.3 7 7.3 7.2 6.1 6 4.5 6 7.6 6.8 7.3 7.5 7.2
L 7.9 8.3 8.8 7.7 8 8 9.1 9.1 7.9 7.8 8.7 7.9 8 8.1
M 2.1 1.8 1.8 1.8 1.8 1.9 1.7 1.8 1.7 1.8 1.8 1.8 1.8 1.8
N 3.4 3.4 3.4 3.5 3.3 3.8 3.8 2.6 3.3 3.4 3.3 3.3 3.3 3.4
P 7.1 7 7 6.9 6.7 7.9 7.3 15.5 8 7.3 8.1 7.6 7.4 7
Q 4.5 4.4 4.3 4.8 4.1 4.4 3.8 4.6 3.9 4.3 4.2 4.3 4.4 4.3
R 7.4 7.5 7.7 7.3 11 7.3 6.8 5.1 6.1 6.8 6.4 6.9 7 7
S 10.6 10.7 10.3 11.7 10.9 11.7 9.8 9.2 11.6 11.1 11.3 10.6 10.8 10.5
T 5.7 5.5 5.3 5.4 5 5.7 4.4 4.1 5.9 5.1 5.7 5.5 5.6 5.5
V 5.2 5.2 5.2 5.1 4.8 5.4 5.5 5.3 5.2 5 5.3 5 5.3 5.1
W 0.8 0.7 0.7 0.7 0.6 0.6 0.6 0.8 0.5 0.7 0.7 0.7 0.7 0.8
Y 2.2 2.2 2.2 2.1 2 2.1 2.3 2.1 2 2.1 2.1 3.2 2.1 2.5
  1. a Only seven positions to the left/right of the phosphorylation site were collected