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Table 1 Top DaliLite results using CcmB as a query against the PDB25 dataset

From: ECOD: identification of distant homology among multidomain and transmembrane domain proteins

Query Hit Z-score Protein Old X-group
CcmB 4mlb-B 8.8 PF0708 MatE transporter
CcmB 2yvx-A 8.2 MG2+ TRANSPORTER MGTE MatE transporter
CcmB 5xjy-A 8 ATP-BINDING CASSETTE SUBFAMILY A MEMBER 1 Type II ABC exporter
CcmB 6an7-C 8 ABC TRANSPORTER Type II ABC exporter
CcmB 5yck-A 7.2 MULTI DRUG EFFLUX TRANSPORTER MatE transporter
CcmB 5do7-A 7.2 ATP-BINDING CASSETTE SUBFAMILY G MEMBER 5 Type II ABC exporter
5x5yF 5x5y-F 46.6 ABC transporter LptB2FG Type II ABC exporter
5x5yF 5l75-G 23.3 LIPOPOLYSACCHARIDE ABC TRANSPORTER Type II ABC exporter
5x5yF 5l75-F 23 LIPOPOLYSACCHARIDE ABC TRANSPORTER Type II ABC exporter
5x5yF 5x5y-G 19.6 ABC transporter LptB2FG Type II ABC exporter
5x5yF 5a63-C 9.5 NICASTRIN Type II ABC exporter
5x5yF 4mlb-B 8.1 PF0708 MatE transporter
5x5yF 5xjy-A 8.1 ATP-BINDING CASSETTE SUBFAMILY A MEMBER 1 Type II ABC exporter
5x5yF 5yck-A 7.7 MULTI DRUG EFFLUX TRANSPORTER MatE transporter
5x5yF 3mkt-A 7.6 MULTI ANTIMICROBIAL EXTRUSION PROTEIN MatE transporter
5x5yF 5do7-A 7.5 ATP-BINDING CASSETTE SUBFAMILY G MEMBER 5 Type II ABC exporter
4mlbB 4mlb-B 70.4 PF0708 MatE transporter
4mlbB 5yck-A 41.7 MULTI DRUG EFFLUX TRANSPORTER MatE transporter
4mlbB 3mkt-A 36.2 MULTI ANTIMICROBIAL EXTRUSION PROTEIN MatE transporter
4mlbB 6cc4-A 14.2 SOLUBLE CYTOCHROME B562, LIPID II FLIPPASE MURJ C MatE transporter
4mlbB 5l75-F 8 LIPOPOLYSACCHARIDE ABC TRANSPORTER Type II ABC exporter
4mlbB 5x5y-F 7.3 ABC transporter LptB2FG Type II ABC exporter
4mlbB 5x5y-G 7.1 ABC transporter LptB2FG Type II ABC exporter