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Table 1 Statistics of output sequencing of radish ‘HX-1’ and advance inbred lines ‘HX-2’, ‘HX-3’ fleshy root transcriptome

From: De novo transcriptome sequencing of radish (Raphanus sativus L.) fleshy roots: analysis of major genes involved in the anthocyanin synthesis pathway

Samples HX_RW_root(HX-2) HX_RP_root(HX-3) HX_RR_root(HX-1)
Total raw reads 66, 356, 258 65,767,538 66,536,257
Total clean reads 63, 371, 122 63,863,598 64,433,360
Total clean nucleotides (nt) 5, 703, 400, 980 5, 747, 723, 820 5,799,002,400
Q20 percentage 97.79% 96.86% 97.74%
N percentage 0.00% 0.00% 0.00%
GC percentage 47.32% 46.97% 47.25%
  1. Note: a Q20 percentage (percentage of sequences with sequencing error rate lower than 1%)