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Fig. 9 | BMC Molecular and Cell Biology

Fig. 9

From: Analyses of the folding sites of irregular β-trefoil fold proteins through sequence-based techniques and Gō-model simulations

Fig. 9

Gō-model simulation results of 1TTU and 1A8D. The upper figures are the results of 1TTU, including (a) Free energy profile at T = 0.938, (b) Contact frequency map at Q = 0.20 and (c) Contact frequency map at Q = 0.30. The lower figures are the results of 1A8D, including (d) Free energy profile at T = 0.921, (e) Contact frequency map at Q = 0.20 and (f) Contact frequency map at Q = 0.40. The contacts enclosed by a blue circle are the long-range contacts observed in an initial state of folding

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