Fig. 2
From: Glutantβase: a database for improving the rational design of glucose-tolerant β-glucosidases
Variability of the ten best models constructed by comparative modeling for three β-glucosidases: (a) Klebsiella pneumoniae (40% of identity with the template of PDB ID: 4B3K); (b) Trifolium repens (60% of identity with the template of PDB ID: 1CBG); and (c) Thermotoga neapolitana (90% of identity with the template of PDB ID: 1OD0). For each protein (a, b, and c), ten models were superimposed using PyMOL software [78]. On the left, we showed the protein backbone as a cartoon of ten best models superimposed. On the right, we showed all residues as lines of the ten best models superimposed. In the center, we arbitrarily highlighted one amino acid: (a) R383, (b) E436, and (c) E360