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Table 2 The muscle-related GO terms of DELs co-expressed genes during muscle development stages in Huainan and Large white pigs

From: LncRNA IMFlnc1 promotes porcine intramuscular adipocyte adipogenesis by sponging miR-199a-5p to up-regulate CAV-1

GO terms

H58/H38

LW58/LW38

H78/H58

LW78/LW58

H58/LW58

H78/LW78

muscle cell differentiation

↑ 9 (0.260)

 

↑ 9 (0.241)

↑10 (0.062)

↑ 6 (0.438)

↓ 6 (0.868)

contractile fiber

↑ 8 (0.065)

↑ 7 (0.180)

↑ 8 (0.084)

↑ 8 (0.011)

↑ 5 (0.361)

 

myofibril

↑ 7 (0.089)

↑ 6 (0.268)

↑ 7 (0.106)

↑ 7 (0.027)

↑ 4 (0.415)

 

regulation of glucose metabolic process

↑ 5 (0.124)

↑ 5 (0.227)

↑ 5 (0.163)

↑ 5 (0.046)

↑ 3 (0.480)

 

muscle structure development

↑12 (0.157)

↑11 (0.278)

↑12 (0.174)

↑13 (0.029)

↑ 8 (0.385)

 

muscle system process

↑ 9 (0.160)

↑ 8 (0.278)

↑ 6 (0.247)

↑ 9 (0.061)

↑ 6 (0.385)

 

muscle tissue development

↑11 (0.148)

↑10 (0.278)

↑10 (0.212)

↑13 (0.011)

 

↓ 7 (0.757)

skeletal muscle tissue development

↑ 8 (0.160)

↑ 8 (0.240)

 

↑10 (0.011)

↑ 5 (0.415)

↓ 5 (0.778)

skeletal muscle organ development

↑ 8 (0.161)

↑ 8 (0.260)

 

↑10 (0.011)

↑ 5 (0.438)

↓ 5 (0.847)

muscle organ development

↑10 (0.180)

↑ 9 (0.312)

 

↑12 (0.013)

↑ 6 (0.480)

↓ 7 (0.608)

myofibril assembly

↑ 4 (0.124)

 

↑ 4 (0.163)

↑ 4 (0.046)

 

↓ 3 (0.544)

striated muscle tissue development

↑10 (0.180)

↑ 9 (0.334)

 

↑12 (0.015)

 

↓ 7 (0.608)

response to oxygen-containing compound

↑19 (0.124)

↑19 (0.179)

    

cell proliferation

   

↑20 (0.195)

 

↓16 (0.544)

  1. Note: ↑: up-regulated; ↓: down-regulated; numbers next to the arrow showed the number of differently expressed genes in this GO term; numbers in the brackets showed the corrected P-values