Target genes (MHC Class) | Localization | Primer sequences | Genomic DNA amplicon size (bp)a | cDNA Amplicon size (bp) (Accession numbers) |
---|---|---|---|---|
SLA-1 (I) | SSC 7p1.1 | TGGTGGCTGGAGTTGTGATC | 515 | 66 (NM_001097431) |
CCTGAGTGTAGCTCCCTCCT | ||||
SLA-DRA (II) | SSC 7q1.1 | CCCTCAACCGAGGATGTCTA | 432 | 126 (NM_001113706) |
AGCACACACGGTGTTCTCTG | ||||
TNFα (III) | SSC 7p1.1 | ACTGCACTTCGAGGTTATCGG | 887 | 118 (NM_214022) |
GGCGACGGGCTTATCTGA | ||||
B2M | SSC 1q1.7 | TCATCCAACCCAGATGCA | 1733 | 162 (NM_213978) |
TTCTACCTTCTGGTCCACACTGA | ||||
HLA-A (I) | HSA 6p22.1 | TACAACCAGAGCGAGGC | 373 | 132 (NM_002116) |
CTCGTTCAGGGCGATGTAAT | ||||
HLA-DRA (II) | HSA 6p21.32 | CCCTCAACTGAGGACGTTTA | 393 | 105 (NM_019111) |
AGTCTCTGGGAGAGGGCTTG | ||||
TNFα (III) | HSA 6p21.33 | GCTGCACTTTGGAGTGATCG | 916 | 123 (NM_000594) |
TGGGCTACAGGCTTGTCACT | ||||
B2M | HSA 15q21.1 | TACACTGAATTCACCCCCACTG | 2020 | 143 (NM_004048.2) |
TCCAATCCAAATGCGGCATC |