Table 5 Genes upregulated by the Z-VAD-fmk at mid-tail regression
KyotoGrail KH gene model | Expression ratio | Identity and/or GO function | References in ascidians/reported functions in animals |
|---|---|---|---|
KH.C12.516 | 11,357 | neutral ceramidase-like | Kassmer et al. (2015) migration |
KH.C9.170 | 10,571 | protein CNPPD1 | x |
KH.C2.541 | 7634 | cell cycle control protein 50A | x |
KH.C3.623 | 7551 | kinesin-like protein 2 | x |
KH.C4.189 | 6713 | ribosomal protein CEP52 | x |
KH.L124.15 | 5285 | vesicular integral-membrane protein VIP36 | x |
KH.S522.7 | 5242 | TPA: zinc finger protein | x |
KH.C14.231 | 4625 | 60S ribosomal protein L12 | x |
KH.S605.3 | 4398 | gamma-crystallin S | x |
KH.C9.791 | 4198 | integrin alpha-2-like | migration |
KH.C4.73 | 4127 | uncharacterized protein LOC100175287 | x |
KH.L5.23 | 4122 | uncharacterized protein LOC100179749 | x |
KH.C1.568 | 3255 | uncharacterized protein LOC100176279 | x |
KH.S390.2 | 3227 | RNA-binding motif, single-stranded-interacting protein 1 | x |
KH.C9.660 | 3187 | supervillin-like | migration |
KH.L106.13 | 3179 | DENN domain-containing protein 5B-like | x |
KH.S534.8 | 3075 | coiled-coil domain-containing protein 178-like | x |
KH.L108.23 | 2846 | protein DD3–3 | x |
KH.C7.614 | 2824 | SLIT and NTRK-like protein 3 | x |
KH.C2.448 | 2822 | plasminogen | x |
KH.C7.297 | 2732 | solute carrier family 22 member 21 | x |
KH.L37.43 | 2586 | L-threonine ammonia-lyase | x |
KH.C11.274 | 2571 | P-selectin-like | Chambon et al., 2007 (ci0100139289) apoptosis |
KH.C11.218 | 2518 | cytospin-A | x |
KH.L59.3 | 2488 | uncharacterized protein LOC100175851 | x |
KH.C10.71 | 2418 | 3-phosphoinositide-dependent protein kinase 1 | x |
KH.C9.715 | 2397 | neurobeachin-like protein 1 | x |
KH.C3.562 | 2392 | unconventional myosin-X | x |
KH.C4.94 | 2374 | lipopolysaccharide-induced tumor necrosis factor-alpha factor | x |
KH.S534.2 | 2333 | RB1-inducible coiled-coil protein 1 | x |
KH.C9.496 | 2327 | uncharacterized protein LOC100183253 | x |
KH.C1.10 | 2314 | LIM and SH3 protein | Terasaki et al., 2008 |
KH.C11.93 | 2252 | N-acetyltransferase 6 | x |
KH.L112.30 | 2179 | transmembrane matrix receptor MUP-4-like | x |
KH.C11.567 | 2162 | serine palmitoyltransferase 2 | x |
KH.L23.11 | 2094 | uncharacterized protein LOC100178692 | x |
KH.C11.637 | 2056 | putative glutathione-specific gamma-glutamylcyclotransferase 2 | x |
KH.C7.260 | 2031 | tropomyosin-like protein | Nakayama et al., 2002 migration |