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Table 1 Alignment scores of MarvelD3 sequences from different vertebrates

From: Identification of MarvelD3 as a tight junction-associated transmembrane protein of the occludin family

  H. sapiens isoform 1NM_001017967 H. sapiens isoform 2NM_052858 M. musculus isoform 1NM_212447 M. musculus isoform 2NM_028584 C. lupus f. Isoform 1XM_848243 C. lupus f. Isoform 2XM_546843 X. laevis Variant ABC_068841 G. gallus Variant AXM_418989 G. gallus Variant BXM_414239
H. sapiens isoform 2 NM_052858 63 100        
M. musculus isoform 1 NM_212447 72 40 100       
M. musculus isoform 2 NM_028584 43 68 61 100      
C. lupus f. Isoform 1 XM_848243 71 39 67 39 100     
C. lupus f. Isoform 2 XM_546843 40 69 38 68 61 100    
X. laevis Variant A BC_068841 25 43 24 42 23 44 100   
G. gallus Variant A XM_418989 30 51 28 48 28 50 44 100  
G. gallus Variant B XM_414239 30 24 30 21 28 22 23 24 100
D. rerio Variant A BC_055662 25 40 26 37 23 40 39 31 25
  1. MarvelD3 sequences were retrieved from Genbank and aligned using ClustalW (see Fig. 1 for a selection of the alignments). Indicated are all Genbank accession numbers. The scores reflect percent identity. For mammals, the two alternatively spliced isoforms were used. Two different MarvelD3 genes, variants A and B, exist in chicken. Only variant A was found in X. laevis and zebrafish.