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Table 3 Primer sequences, annealing temperatures of primer sets (°C), expected PCR fragment sizes (bp) and accession numbers or references

From: Newborn pig trachea cell line cultured in air-liquid interface conditions allows a partial in vitro representation of the porcine upper airway tissue

Primer name

Primers sequence

Annealing temperature (°C)

PCR product (bp)

Accession number or reference

ACTB

CACGCCATCCTGCGTCTGGA AGCACCGTGTTGGCGTAGAG

63

100

[24]

B2MI

CAAGATAGTTAAGTGGGATCGAGAC TGGTAACATCAATACGATTTCTGA

58

161

[24]

GAPDH

CTTCACGACCATGGAGAAGG CCAAGCAGTTGGTGGTACAG

63

170

AF017079

HMBS-2

AGGATGGGCAACTCTACCTG GATGGTGGCCTGCATAGTCT

58

83

[24]

HPRT-1

GGACTTGAATCATGTTTGTG CAGATGTTTCCAAACTCAAC

60

91

[24]

KRT 8

TGACCGACGAGATCAACTTC TGATGTTCCGGTTCATCTCC

60

294

NM_001159615

MUC1

TAAAGAAGACGGGCTTCTGG CCGCTTTAAGCCGATCAAAC

60

134

XM_001926883

MUC2

ACCCGCACTACGTCACCTTC GGCAGGACACCTGGTCATTG

62

150

BX671371

MUC4

CTGCTCTTGGGCACTATATG CCTGTGACTGCAGAATCAAC

60

133

DQ848681

OCLN

CTACATAATGGGCGTCAACC GGGCTGCTCGTCATAAATAC

60

298

NM_001163647

RPL-19

AACTCCCGTCAGCAGATCC AGTACCCTTCCGCTTACCG

60

147

[25]

SDHA

CTACAAGGGGCAGGTTCTGA AAGACAACGAGGTCCAGGAG

58

141

[24]

TBP-1

AACAGTTCAGTAGTTATGAGCCAGA AGATGTTCTCAAACGCTTCG

60

153

[24]

VIL1

AGAAGTGGACGGTGCCCAAC TCTCGCCGATGAGGTAGGTG

64

273

XM_001925167

ZO-1/TJP1

GAGGGCATTTCCCACGTTTC GCTTTAGAGCCGAGTCCTTG

62

256

XM_003353439

  1. Reference genes are underlined.