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Table 1 Differentially expressed genes in cells with nuclear syndecan-1 (FLs1) versus cells with syndecan-1 lacking the NLS signal (NLSdel)

From: Molecular targets and signaling pathways regulated by nuclear translocation of syndecan-1

FLs1 vs NLSdel
Symbol Gene name FC q
EFCAB6 EF-hand calcium binding domain 6 2.24 0.013
CCKAR cholecystokinin A receptor 1.97 0.025
EGR1 early growth response 1 1.85 0.003
CDCP1 CUB domain containing protein 1 1.84 0.00
ZNF676 zinc finger protein 676 1.84 0.031
NEK11 NIMA (never in mitosis gene a- related kinase 11 1.77 0.001
SLC16A4 solute carrier family 16, member 4 (monocarboxylic acid transporter 5) 1.75 0.013
DOCK8 dedicator of cytokinesis 8 1.72 0.00
LMBRD2 LMBR1 domain containing 2 1.68 0.037
SNORA56 small nucleolar RNA, H/ACA box 56 1.67 0.015
LPCAT2 lysophosphatidylcholine acyltransferase 2 1.6 0.017
LSM14B LSM14B, SCD6 homolog B (S. cerevisiae) 1.58 0.047
HBG1 hemoglobin, gamma A 1.57 0.01
SNORA13 small nucleolar RNA, H/ACA box 13 1.57 0.026
SNORD116–6 small nucleolar RNA, C/D box 116–6 1.57 0.00
CCDC88C coiled-coil domain containing 88C 1.56 0.03
EHF ets homologous factor 1.52 0.006
PMFBP1 polyamine modulated factor 1 binding protein 1 1.51 0.015
PLA2G5 phospholipase A2, group V −1.59 0.002
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7 −1.6 0.001
  1. Differentially expressed genes identified by microarray analysis in fibrosarcoma cells with nuclear syndecan-1 (FLs1) versus syndecan-1 lacking the NLS signal (NLSdel). FC fold change, q false discovery rate