From: Prediction of novel mouse TLR9 agonists using a random forest approach

S.no | Feature | Description | Type |
---|---|---|---|

1 | A | Count of A nucleotides | Numerical |

2 | T | Count of T nucleotides | Numerical |

3 | G | Count of G nucleotides | Numerical |

4 | C | Count of C nucleotides | Numerical |

5 | d_CG2_1 | Distance between occurrences 2 and 1 of CG motif | Numerical |

6 | d_CG3_1 | Distance between occurrences 3 and 1 of CG motif | Numerical |

7 | d_CG3_2 | Distance between occurrences 3 and 2 of CG motif | Numerical |

8 | d_AG2_1 | Distance between occurrences 2 and 1 of AG motif | Numerical |

9 | d_AG3_1 | Distance between occurrences 3 and 1 of AG motif | Numerical |

10 | d_AG3_2 | Distance between occurrences 3 and 2 of AG motif | Numerical |

11 | d_GG2_1 | Distance between occurrences 2 and 1 of GG motif | Numerical |

12 | d_GG3_1 | Distance between occurrences 3 and 1 of GG motif | Numerical |

13 | d_GG3_2 | Distance between occurrences 3 and 2 of GG motif | Numerical |

14 | d_CC2_1 | Distance between occurrences 2 and 1 of CC motif | Numerical |

15 | d_CC3_1 | Distance between occurrences 3 and 1 of CC motif | Numerical |

16 | d_CC3_2 | Distance between occurrences 3 and 2 of CC motif | Numerical |

17 | d_TCT2_1 | Distance between occurrences 2 and 1 of TCT motif | Numerical |

18 | d_TCT3_1 | Distance between occurrences 3 and 1 of TCT motif | Numerical |

19 | d_TCT3_2 | Distance between occurrences 3 and 2 of TCT motif | Numerical |

20 | d_TTC2_1 | Distance between occurrences 2 and 1 of TTC motif | Numerical |

21 | d_TTC3_1 | Distance between occurrences 3 and 1 of TTC motif | Numerical |

22 | d_TTC3_2 | Distance between occurrences 3 and 2 of TTC motif | Numerical |

23 | d_TGT2_1 | Distance between occurrences 2 and 1 of TGT motif | Numerical |

24 | d_TGT3_1 | Distance between occurrences 3 and 1 of TGT motif | Numerical |

25 | d_TGT3_2 | Distance between occurrences 3 and 2 of TGT motif | Numerical |

26 | PMI1 | Principal Moment of Inertia 1 | Numerical |

27 | PMI2 | Principal Moment of Inertia 2 | Numerical |

28 | Mu_x | Center of mass in x direction | Numerical |

29 | Mu_y | Center of mass in y direction | Numerical |

30 | CG1 | Presence of CG at position 1 | Fingerprint |

31 | GC1 | Presence of GC at position 1 | Fingerprint |

32 | GT1 | Presence of GT at position 1 | Fingerprint |

33 | GT18 | Presence of GT at position 18 | Fingerprint |

34 | GCG6 | Presence of GCG at position 6 | Fingerprint |

35 | GT22 | Presence of GT at position 22 | Fingerprint |

36 | GT21 | Presence of GT at position 21 | Fingerprint |

37 | CGCG5 | Presence of CGCG at position 5 | Fingerprint |

38 | GC5 | Presence of GC at position 5 | Fingerprint |

39 | GT12 | Presence of GT at position 12 | Fingerprint |

40 | TC9 | Presence of TC at position 9 | Fingerprint |